Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATATCTGTGTGCCCTAGGG
.(((((((((((((((......&)))).))))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012134
GeneSymbolLMOD1
Binding site3199,3218
Score0.846
Seed1
Au0.441
Energy-15.9
Binding len19
Me-3.793
Phylopstem0.6765208
Phylopflank0.5594306750000002
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end2
Position3UTR
2D Structure