Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAACAATGACCTTATTTCCTACAACAGTGTCTGGGTTGCGTGCCAGC
..(((((((.((((.(((((..&.))))).)))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012142
GeneSymbolCCNDBP1
Binding site530,577
Score0.846
Seed1
Au0.544
Energy-21.8
Binding len20
Me-6.935
Phylopstem2.1977017142857145
Phylopflank1.4668229612500001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure