Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAAAAATGAAGGATGCAGGACGCAGCTTTCTCCTGGAACCGAACGCAAT
(((((((((((.(((((((((&))))))))).................))))))).................)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017018074
GeneSymbolLRRC4C
Binding site230,285
Score0.846
Seed1
Au0.5
Energy-19.9
Binding len55
Me-7.284
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings46
Pairings in 3prime end8
Position5UTR
2D Structure