Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCCGGGTGGCCAGGG
.((((((.(((...((((....&))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012171
GeneSymbolTSPAN17
Binding site2350,2367
Score0.923
Seed1
Au0.353
Energy-18.7
Binding len17
Me-11.6
Phylopstem-0.5222848333333333
Phylopflank-0.26062189
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure