Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTCATTTCTGGCCAGGTT
(((((((....((((.(((...&))).))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012182
GeneSymbolFOXB1
Binding site2227,2247
Score0.846
Seed1
Au0.574
Energy-17.2
Binding len20
Me-11.608
Phylopstem1.730521714285714
Phylopflank1.79894398475
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure