Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATTTTAGCATTCAGGTGCCAGGA
.((((((((..(((((......&.)))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012198
GeneSymbolGCA
Binding site149,174
Score1.0
Seed1
Au0.485
Energy-18.3
Binding len18
Me-7.861
Phylopstem0.9992764749999999
Phylopflank1.4826505550000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure