Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATGCTGCTATGTGCCAGGTA
((((((((((....((((((((&)))).))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012199
GeneSymbolAGO1
Binding site12212,12234
Score0.846
Seed1
Au0.544
Energy-20.7
Binding len22
Me-12.255
Phylopstem-0.06684898999999997
Phylopflank0.17676988500000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure