Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAAGTTGGCCAGGA
.((((((..((..(((((....&))))).))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012199
GeneSymbolAGO1
Binding site1188,1205
Score0.923
Seed1
Au0.471
Energy-19.0
Binding len17
Me-11.799
Phylopstem6.7925885
Phylopflank5.976015032499999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure