Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&CGTGTCTCTACTAAAAATACAAAAATTAGCCAGGCGTGGTGGTGC
(((((((((.(((((((((((&))))).......................)))))).))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_012204
GeneSymbolGTF3C4
Binding site3793,3838
Score0.846
Seed1
Au0.529
Energy-16.1
Binding len45
Me-5.18
Phylopstem0.02318382941176472
Phylopflank-0.08245910499999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure