Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACATTGAGAATAGTCTTTATGCCACGGA
.(((((((((((((((((((..&))))))))))...........))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012206
GeneSymbolHAVCR1
Binding site1357,1389
Score0.846
Seed1
Au0.588
Energy-21.3
Binding len32
Me-3.793
Phylopstem0.5661105161290323
Phylopflank0.5106937674999998
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end6
PositionCDS
2D Structure