Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTGTTAGAGTTCGAAAAGCTGAGAATCCTCAGTGTTTGCTAGGTG
((((((((.(((.((..(((((&.)))))..)).))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012233
GeneSymbolRAB3GAP1
Binding site944,992
Score0.885
Seed1
Au0.647
Energy-21.0
Binding len24
Me-6.516
Phylopstem5.0246925000000005
Phylopflank4.8508634945
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure