Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCGTGTGCGTGCCAGGTT
(((((((((.((((((......&)))).)).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012254
GeneSymbolSLC27A5
Binding site1787,1805
Score0.923
Seed1
Au0.426
Energy-18.9
Binding len18
Me-5.18
Phylopstem1.2031239133333334
Phylopflank-0.91101336125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure