Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTGTGTGCACGGCGG
.(((((((((((..(((((...&)))))))))))).))).).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012260
GeneSymbolHACL1
Binding site706,725
Score0.846
Seed1
Au0.5
Energy-17.0
Binding len19
Me-5.939
Phylopstem3.279051615384615
Phylopflank4.0176211275
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure