Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTGCTTGTAAGCTGGT
..(((((.(((((.((((((((&))))))))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012262
GeneSymbolHS2ST1
Binding site2939,2959
Score0.846
Seed0
Au0.721
Energy-18.2
Binding len20
Me-8.127
Phylopstem0.8622202875
Phylopflank0.8849333025000001
Longest consecutive pairings13
Position of longest consecutive pairings7
Pairings in 3prime end8
Position3UTR
2D Structure