Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGGCATGAGGGA
...((((.(((((((((((..&))))))))).)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_012262
GeneSymbolHS2ST1
Binding site3296,3313
Score1.0
Seed0
Au0.618
Energy-25.2
Binding len17
Me-8.828
Phylopstem-0.1077426416666667
Phylopflank0.22733564375
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure