Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCTGGGATGTGCCAGGTG
(((((((((((...(((.....&)))...).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012288
GeneSymbolTRAM2
Binding site3617,3636
Score0.846
Seed1
Au0.471
Energy-18.6
Binding len19
Me-9.43
Phylopstem-0.8600940866666668
Phylopflank-0.38802521975000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure