Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTGCATTCTTGTGCCT
....((((((.(((((((((((&)))))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012294
GeneSymbolRAPGEF5
Binding site3634,3654
Score0.846
Seed0
Au0.544
Energy-19.1
Binding len20
Me-12.371
Phylopstem0.558869081818182
Phylopflank-0.011382970000000013
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure