Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTCCAGAGGTTTGCCAGGC
.(((((((.((..((.((((..&)))).))...)).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012294
GeneSymbolRAPGEF5
Binding site5094,5115
Score0.846
Seed1
Au0.544
Energy-18.7
Binding len21
Me-9.719
Phylopstem2.6052385714285715
Phylopflank3.0053649762500005
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure