Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGCTGCACTCACTTCCTTC&GGAGGAAGGGAGGACATGCCTCT
(.(((((..(((.((((((((&)))))))).)))..)).))).).
Details
MiRNAhsa-miR-647
RefseqIDNM_001330414
GeneSymbolBCAS3
Binding site3394,3417
Score0.923
Seed0
Au0.485
Energy-22.7
Binding len23
Me-9.76
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end8
Position3UTR
2D Structure