Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCCTGGGCGTGTGCTGGGTT
(((((((((((...........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012315
GeneSymbolKLK9
Binding site1277,1298
Score0.846
Seed1
Au0.353
Energy-16.5
Binding len13
Me-10.399
Phylopstem0.664615
Phylopflank1.0366411249999998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure