Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACCTTGTTGGCCAGGC
.((((((..((((.(((((...&))))).))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012322
GeneSymbolLSM5
Binding site1809,1828
Score0.846
Seed1
Au0.544
Energy-20.5
Binding len19
Me-8.02
Phylopstem0.061881433333333326
Phylopflank1.1278095425000003
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure