Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGCAGGAGTGGAGGACCTGCTGCAGCTGCAC
.(((((((((((((((.((((&)))).)))..............)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017018174
GeneSymbolSPTBN2
Binding site2365,2400
Score0.846
Seed1
Au0.353
Energy-26.3
Binding len35
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure