Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACGTTGGCAGGTT
(((((.((....((((((((..&)))))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012341
GeneSymbolGTPBP4
Binding site686,703
Score0.846
Seed0
Au0.485
Energy-16.5
Binding len17
Me-14.309
Phylopstem5.588892599999999
Phylopflank5.3804044675
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure