Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACACGTACTATTTGTTCCTGTCTTTCTGCCTCCAGCTTGTAT
.((((((((.(((((((((((&))))))))........................)))..))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017018310
GeneSymbolCCDC82
Binding site3324,3371
Score0.846
Seed1
Au0.559
Energy-18.7
Binding len47
Me-5.036
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings39
Pairings in 3prime end8
Position3UTR
2D Structure