Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCAGGGGTGCCGGC
..(((((((.(..(((((((..&)))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012416
GeneSymbolRANBP6
Binding site31,49
Score0.923
Seed1
Au0.382
Energy-19.3
Binding len18
Me-10.835
Phylopstem2.7938111428571424
Phylopflank0.8061724769047619
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure