Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCATCTGTGTGTGAGGA
.(((.((((((((((((((...&))))))).))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012417
GeneSymbolPITPNC1
Binding site5063,5083
Score1.0
Seed0
Au0.691
Energy-20.2
Binding len20
Me-7.912
Phylopstem0.7106828399999998
Phylopflank0.2923133205
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure