Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTAGCTAATTGTGCCAGGG
.(((((((((............&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012424
GeneSymbolRPS6KC1
Binding site3541,3561
Score1.0
Seed1
Au0.662
Energy-16.4
Binding len11
Me-13.079
Phylopstem0.3795589777777778
Phylopflank0.4574615775
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure