Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGCCATCCTTGAGAAAAATAGACAGATGGCCAAGGAGAGGGGCCTAATAAGCCCCAGTGA
(((((((((((((((.(((...&.)))..)))))))))))...........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001345
GeneSymbolDGKA
Binding site236,299
Score1.0
Seed1
Au0.515
Energy-24.5
Binding len33
Me-4.171
Phylopstem0.8859693769230769
Phylopflank1.3702487275000004
Longest consecutive pairings11
Position of longest consecutive pairings16
Pairings in 3prime end4
Position5UTR
2D Structure