Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGATATGTCT
....((((((((((((((....&)))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012426
GeneSymbolSF3B3
Binding site4115,4131
Score0.846
Seed0
Au0.5
Energy-16.9
Binding len16
Me-9.547
Phylopstem0.44654432
Phylopflank0.7908236449999997
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure