Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGGGGCAGAAAGTT
.(((..(((((((((((((...&))))))))))).))..))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_017018463
GeneSymbolTRIM5
Binding site376,396
Score0.923
Seed0
Au0.471
Energy-23.7
Binding len20
Me-9.813
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure