Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTACTGTCGGGG
.(((((((......((((((((&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012432
GeneSymbolSETDB1
Binding site882,898
Score0.923
Seed1
Au0.559
Energy-16.3
Binding len16
Me-14.41
Phylopstem5.2514138625
Phylopflank4.425751046249999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure