Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AACTCCATCTACATTGGTTCCCAGGA
.(((((.(..((((((((((..&.))))))))))..).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012433
GeneSymbolSF3B1
Binding site3836,3862
Score0.923
Seed0
Au0.588
Energy-23.0
Binding len21
Me-7.636
Phylopstem5.741720899999999
Phylopflank5.82207165
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure