Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATACTACTCCTACCCGTGTGCTAGGA
.((((((((((...((((....&.))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_012464
GeneSymbolTLL1
Binding site5804,5833
Score1.0
Seed1
Au0.588
Energy-20.1
Binding len18
Me-9.286
Phylopstem-0.4643831500000001
Phylopflank-0.06666261125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure