Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTGCATTGGAGGTGCCC
....(((((.((((((((((((&))))))))))))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_013246
GeneSymbolCLCF1
Binding site1266,1287
Score1.0
Seed0
Au0.544
Energy-20.0
Binding len21
Me-10.789
Phylopstem1.6820693333333334
Phylopflank3.2876576625
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure