Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGAGGATACTGCGGGC
....(((((((((((((((((&))))))).)))...))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_013261
GeneSymbolPPARGC1A
Binding site3289,3311
Score0.923
Seed0
Au0.544
Energy-26.9
Binding len22
Me-9.547
Phylopstem-0.08656733333333333
Phylopflank1.7119199187500005
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end8
Position3UTR
2D Structure