Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCGGGGCTGTGTGCCGGC
..((((((((((..........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_013276
GeneSymbolSHPK
Binding site2073,2092
Score0.846
Seed1
Au0.382
Energy-16.1
Binding len12
Me-8.071
Phylopstem-0.17687567
Phylopflank0.08000191874999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure