Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTAGTTGTATGTCAT
...(((((((((((..(((...&)))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_013302
GeneSymbolEEF2K
Binding site5088,5105
Score0.885
Seed0
Au0.618
Energy-17.4
Binding len17
Me-7.483
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure