Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACATGTGTGCACTCAGGC
.((((((((((.((((((....&))))))))))))...)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_013309
GeneSymbolSLC30A4
Binding site6435,6455
Score0.846
Seed1
Au0.559
Energy-17.3
Binding len20
Me-7.14
Phylopstem5.0317272307692305
Phylopflank4.362259904749999
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure