Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTTTCTTCGTCTCGTAGGATGTGCTATGATTGGTGCCAGGC
.((((((((.((((((((....&.)))).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_013319
GeneSymbolUBIAD1
Binding site1760,1804
Score0.846
Seed1
Au0.485
Energy-19.8
Binding len19
Me-5.036
Phylopstem-0.4593879355555556
Phylopflank-0.09292852124999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure