Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTG
(((((((((......((((((.&.))))))......))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_013323
GeneSymbolSNX11
Binding site2384,2426
Score1.0
Seed1
Au0.5
Energy-20.3
Binding len23
Me-14.233
Phylopstem0.1449902333333333
Phylopflank1.91162677375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure