Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGAAGATGCCAGA
..(((((((....(((((....&)))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_013324
GeneSymbolCISH
Binding site566,583
Score0.923
Seed1
Au0.397
Energy-18.4
Binding len17
Me-13.66
Phylopstem0.5180739857142856
Phylopflank0.53176432
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure