Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCCTTTCCCCCTGTTTTGTGTGCCAGT
..(((((((((((..(((....&.)))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_013327
GeneSymbolPARVB
Binding site5119,5149
Score0.846
Seed1
Au0.632
Energy-20.1
Binding len18
Me-6.549
Phylopstem-0.4240165454545455
Phylopflank0.21646869000000002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure