Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGTGGGGGCTGACCCCAGCTTCCAGGGG
...((((((((((((((((((&))))))..)))))))...........))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_013336
GeneSymbolSEC61A1
Binding site3457,3489
Score0.923
Seed0
Au0.368
Energy-27.7
Binding len32
Me-6.515
Phylopstem0.7319054322580644
Phylopflank0.8477776000000002
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure