Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGAATTAGAGCAGCCAGCAGCTGG
...(((((((((((((.....&.)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017019175
GeneSymbolFBXW8
Binding site4112,4140
Score0.923
Seed0
Au0.515
Energy-22.6
Binding len16
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure