Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTCTAGGCCGGTGGTGAATGCTCACTTACATTGACCGCTGCGAG
(((((((.((((.((((((..&.))))))))).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017019280
GeneSymbolC12orf42
Binding site1653,1700
Score0.846
Seed1
Au0.426
Energy-18.7
Binding len21
Me-7.54
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure