Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GCGTGGCAAAGGTAAC
.....(((((((((.(((((.&))))).))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_013436
GeneSymbolNCKAP1
Binding site5627,5643
Score0.846
Seed0
Au0.544
Energy-19.1
Binding len16
Me-14.401
Phylopstem-0.11036817777777777
Phylopflank-0.026704526250000027
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure