Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGAAGGGAGAGAGAAGACTGGGCTCTCTTGTGTGCCAGGC
.((((((((((((.(.(((...&.)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_013953
GeneSymbolPAX8
Binding site2738,2780
Score0.923
Seed1
Au0.515
Energy-22.6
Binding len18
Me-4.883
Phylopstem3.0322075833333333
Phylopflank4.095662343750002
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure