Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCGACGTGTAGCCAGGG
.((((((.(((.((((.((...&)).))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_013988
GeneSymbolPRKN
Binding site1038,1055
Score0.846
Seed1
Au0.294
Energy-18.1
Binding len17
Me-9.454
Phylopstem-1.3898815000000002
Phylopflank-0.44017990375000005
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure