Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGCAAGGATTCCTCCTCCCTCCAGG
..((((.(((((.((((((((.&)))))))).)))))............)))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_017019903
GeneSymbolSOX5
Binding site1472,1503
Score1.0
Seed0
Au0.412
Energy-23.5
Binding len31
Me-7.79
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings23
Pairings in 3prime end7
PositionCDS
2D Structure