Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGTGCATCGCGACATCAAGCCGGGG
.((((((.((((((((......&))))))))..............)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014002
GeneSymbolIKBKE
Binding site733,762
Score0.846
Seed1
Au0.368
Energy-16.5
Binding len29
Me-6.107
Phylopstem4.533499875
Phylopflank4.79637864625
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end2
PositionCDS
2D Structure